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Novel algorithm identifies adverse drug events across the seven pediatric development stages

Attendance plummets at LA covid vaccination events

Side effects from pediatric drug treatment are responsible for nearly 10 percent of childhood hospitalizations, with nearly half of those being life-threatening. Despite the need to know more about these drugs and the adverse events they can have on children, little evidence is currently available.

Clinical trials remain the gold standard for identifying adverse drug events (ADEs) for adults, but these have both ethical and methodological concerns for the pediatric population. The rapidly changing biologic and physiologic developments only enhance the challenges of understanding the potential impacts of different drug treatments at various stages of childhood.

Researchers at the Columbia University Irving Medical Center developed a novel algorithm that identified nearly 20,000 ADEs signals (information on a new or known side effect that may be caused by a particular drug) across the seven pediatric development stages and made them freely available. This process is strengthened by a novel approach that allows neighboring development stages to enhance the signal detection power, which helps it overcome limited data within individual stages.

This use of predictive modeling on real-world data can help address a critical gap in healthcare research around the understudied pediatric community.

DBMI associate professor Nicholas Tatonetti and Nick Giangreco, a recent Systems Biology PhD graduate at Columbia University, shared these findings in the study A database of pediatric drug effects to evaluate ontogenic mechanisms from child growth and development, which was recently published in Med.

For many reasons, children have historically not been included in clinical trials. There are many ethical issues around including children in trials, and there are several limitations when children are included that make it difficult to assess the effectiveness and safety of drugs.”

Nicholas Tatonetti, DBMI associate professor

Because of these factors, few drugs are specifically approved for use in children, though once drugs are approved for adults, physicians can prescribe them “off-label” to children.

“Since drugs are not studied and approved in children directly, physicians must rely on guidelines for adults,” he added. “Essentially treating children as if they were simply small adults is oftentimes an incorrect assumption. This study is an attempt to elucidate systematically what the potential side effects are when drugs are used off label in children.”

The study goes beyond simply differentiating side effects in children from those in adults. It focuses on ADEs across seven developmental stages, starting at term neonatal and going through late adolescence, and it is powered by sharing information from neighboring developmental stages. For example, the development of infants and toddlers is close enough that there will be more shared characteristics than there would be for infants and those in early or late adolescence.

“Previously, children were essentially grouped together,” Tatonetti said. “There were only a few studies that just focused on children, and they basically focused on people 18 and under or 21 and under in one group. The innovation here is using known developmental stages and our newly introduced DGAMs (disproportionality generalized additive models) to improve power and enable that analysis.”

Tatonetti stressed that these signals are not validated and are primarily meant for researchers. Parents should consult with their pediatricians on specific drug side effects.

Giangreco, currently a Quantitative Translational Scientist at Regeneron, noted one of several side effects that were identified by this model.

“One we corroborated that the FDA had found was that montelukast, an asthma drug, was found to elicit psychiatric side effects,” he said. “We saw that in our database as well, but we were able to pinpoint certain developmental stages where the risk was more significant, especially the second year of life.”

The study also integrates pediatric enzyme expression data and found that pharmacogenes with dynamic childhood expression are associated with pediatric ADEs.

“This was a biologically-inspired modeling strategy,” Giangreco said. “We used what we knew about biological processes occurring during childhood and formed the modeling strategy. These safety signals came from this prior knowledge of the biological processes that are happening. Our data-driven approach really tried to capture what we thought were the important biologically and physiologically dynamic processes that happen during childhood and use that to tease apart observations across the development stages.”

The model was used on a database of 264,453 pediatric reports in the FDA Adverse Event Reporting System (FAERS). The output of the study is available via KidSIDES, a free and publicly available database of pediatric drug safety signals for the research community, as well as the Pediatric Drug Safety portal (PDSportal), which will facilitate evaluation of drug safety signals across childhood growth and development.

“The primary intention is for other researchers to use it, to follow up on signals they may observe,” Tatonetti said. “If they are experts on a particular drug usage, or particular disease domain and have observed these types of effects, they could follow up on them and be reassured, or could look at what the other evidence is for that effect as we aggregate it together. Clinicians can use it as a gut check. Maybe they saw an effect, or they are wondering if others are seeing this effect, and they can check the PDSPortal to see if others are seeing this effect or to prompt them to write another case report to the FDA.”

Source:

Journal reference:

Giangreco, N.P., et al. (2022) A database of pediatric drug effects to evaluate ontogenic mechanisms from child growth and development. Med. doi.org/10.1016/j.medj.2022.06.001.

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Attendance plummets at LA covid vaccination events

Attendance plummets at LA covid vaccination events

Nurse Angel Ho-king sways her head to the sound of salsa music as she waits for people willing to roll up their sleeves to get a shot. Ho-king is part of a four-person crew staffing a covid-19 vaccine table at a health fair in Rampart Village, a predominantly immigrant neighborhood about 10 minutes from Dodger Stadium.

In three hours on a recent Saturday, Ho-king and Brenda Rodriguez, a medical assistant, vaccinated 16 people — far fewer than they had anticipated. Nearly everyone who showed up at the fair, organized by Saban Community Clinic, was an adult seeking a booster shot or a young child getting a first dose (children ages 5 to 11 became eligible for a vaccine late last year).

As covid infections have declined so too has interest in covid vaccines — even though the shots are highly effective at preventing serious illness and death from the virus.

In California’s most-populous county, where more than 1.7 million people have not received even one dose, vaccination events have turned desolate. About 46,000 county residents got their first dose in March, a 79% decline from January, according to the Los Angeles County Department of Public Health.

Those who remain unvaccinated are harder to convince, telling health care workers and vaccination coordinators that they don’t feel a sense of urgency.

According to a January survey by the Public Policy Institute of California, about 1 in 10 California adults said they definitely won’t get vaccinated, which has remained consistent since January 2021, and 86% of unvaccinated adults said the omicron variant wasn’t enough to persuade them. Employers and businesses are dropping or rolling back vaccination mandates. And although proof of vaccination once offered perks like allowing people to go maskless indoors, face coverings are generally no longer required in California.

At a recent vaccination drive coordinated by an immigrant advocacy group in Palmdale, near Lancaster in northern LA County, only two people showed up over four hours, both for second doses. As of April 1, 25% of Palmdale residents ages 5 and up were unvaccinated, compared with 17% of county residents, according to county data.

Jorge Perez, Salva Organization‘s vaccine coordinator, spent a week promoting the event with his team, going door to door, visiting local businesses, and publicizing it on social media. At previous vaccine drives, “we got 42 people, then 20, then four,” said a disappointed Perez. “Now two.”

Perez reduced the number of staffers at vaccination events from five to two in February as the numbers started to dwindle.

Much work remains to be done to combat vaccine misinformation, especially given the spread of BA.2, an omicron subvariant that is highly transmissible, said Dr. Richard Seidman, chief medical officer for L.A. Care, a public Medicaid insurance plan that serves county residents. The number of covid cases and hospitalizations had been declining since February, but the county is again seeing a bump in cases, according to data released this week.

People have various reasons for remaining unvaccinated, Seidman said. “For some, it’s distrust of the government or health care providers in general,” he said. “Some are more cautious and want to take a wait-and-see approach. Others simply don’t believe the science.”

A study published April 11 by JAMA Internal Medicine shows just how entrenched views are. Many people who refused to get vaccinated early on said they were waiting for the shots to get full approval from the FDA. But when the agency’s first full approval of a covid vaccine came in August 2021, the study concluded, it did little to change people’s minds and “had little immediate impact on vaccination intentions.”

In California, unvaccinated people were nearly 14 times as likely to die from covid as people who had been fully vaccinated and received a booster dose, according to state data from March 7-13.

Perez said people getting their first shots now are doing so mainly because they feel obligated — to meet a work requirement, for example, or enter places such as restaurants, bars, and gyms that require proof of vaccination.

That was the case for Modesto Araizas, one of the two people who showed up at the Palmdale vaccine event. Despite contracting covid twice, missing work, and having a hard time breathing, he didn’t get vaccinated until he needed proof of vaccination to eat at his favorite seafood restaurant.

“I haven’t been scared,” said Araizas, 46. “I take vitamins, eat healthy food, and I work out.”

Until recently, the federal government reimbursed doctors, hospitals, and other providers for tests, treatments, and vaccines for uninsured people. But the Health Resources and Services Administration stopped accepting reimbursement claims for tests and treatments March 22, and for vaccinations April 5.

Many uninsured people now will likely need to pay out-of-pocket for tests and other services.

Perez is hoping people might become more open to vaccines if covid tests become too expensive for them. No one will want to keep paying for tests when they can just get a shot, he reasoned.

Nurse Roxanna Segovia works at a pop-up vaccine and testing clinic in front of South LA Cafe in South Central LA. She recently spent 45 minutes trying to persuade a man who had visited the clinic regularly for free tests to get vaccinated.

“He gave me all the reasons he has not been vaccinated, like his civil rights were being violated and Bible verses,” Segovia said. “His job requires it now, and he said he was losing money by missing work waiting for test results. If he continued this way, he wouldn’t be able to feed his family, but even so, he still wasn’t sure if he was making the right choice.”

At the end of their conversation, he got the shot.

This story was produced by KHN, which publishes California Healthline, an editorially independent service of the California Health Care Foundation.




Kaiser Health NewsThis article was reprinted from khn.org with permission from the Henry J. Kaiser Family Foundation. Kaiser Health News, an editorially independent news service, is a program of the Kaiser Family Foundation, a nonpartisan health care policy research organization unaffiliated with Kaiser Permanente.